PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004505158.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 166aa    MW: 18362 Da    PI: 8.3082
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004505158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.5e-0556951054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++  L++l+ +      +K + +++L++A+eYI  L
  XP_004505158.1 56 KDRKEKLGERIVALQQLVSPY-----GKTDTSSVLKEAMEYIGFL 95
                    667788889999999999999.....9***************887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.82E-545100No hitNo description
PROSITE profilePS5088810.5634695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-853113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-1156111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MIASSFCNAD SMFSREEGID VRKMMGHKRS PCSVDQSSYN SIASKKQKPD LEITTKDRKE  60
KLGERIVALQ QLVSPYGKTD TSSVLKEAME YIGFLHKQVK LLSAPYLETS PATEMQGTES  120
CSLRSRGLCL VPVSFTIGVA EGNGADIWAP IKTNSPKYEK DVSQFQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0310981e-175KT031098.1 Glycine max clone HN_CCL_42 bHLH transcription factor (Glyma02g15520.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004505158.11e-122PREDICTED: transcription factor bHLH113 isoform X1
SwissprotQ8GXT37e-31BH123_ARATH; Transcription factor bHLH123
SwissprotQ9LT678e-32BH113_ARATH; Transcription factor bHLH113
TrEMBLG7JNL31e-112G7JNL3_MEDTR; BHLH transcription factor-like protein
STRINGGLYMA07G32980.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108133138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-55bHLH family protein